> For the complete documentation index, see [llms.txt](https://igb.mit.edu/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://igb.mit.edu/bioinformatics-topics/tasks-bioinformatics-methods/phylogenetic-analysis.md).

# Phylogenetic analysis

- [Neighbor Joining method in Phylip](https://igb.mit.edu/bioinformatics-topics/tasks-bioinformatics-methods/phylogenetic-analysis/neighbor-joining-method-in-phylip.md)