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  • Bioinformatics Topics
    • Tools - A Basic Bioinformatics Toolkit
      • Getting more out of Microsoft Excel
      • Bioinformatics Applications of Unix
        • Unix commands applied to bioinformatics
        • Manipulate NGS files using UNIX commands
        • Manipulate alignment files using UNIX commands
      • Alignments and Mappers
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        • Running Joins on Galaxy
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      • UCSC Genome Bioinformatics
        • Interacting with the UCSC Genome Browser
        • Obtaining DNA sequence from the UCSC Database
        • Obtaining genomic data from the UCSC database using table browser queries
        • Filtering table browser queries
        • Performing a BLAT search
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        • Viewing cross-species alignments
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      • Functional Annotation of Gene Lists
      • Multiple Sequence Alignment
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        • Neighbor Joining method in Phylip
      • Microarray data processing with R/Bioconductor
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    • Introduction to Unix and KI Computational Resources
      • Basic Unix
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          • Translating a eukaryotic FASTA file of CDS entries
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          • Visualizing RNAseq Data
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      • Intro to R
        • Before We Start
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  1. Bioinformatics Topics
  2. Tools - A Basic Bioinformatics Toolkit

Bioinformatics Applications of Unix

PreviousGetting more out of Microsoft ExcelNextUnix commands applied to bioinformatics

Last updated 1 year ago

Unix commands applied to bioinformatics
Manipulate NGS files using UNIX commands
Manipulate alignment files using UNIX commands