For the complete documentation index, see llms.txt. This page is also available as Markdown.

Submitting a Nextflow Pipeline using Seqerakit

The Seqera Platform Cloud allows you to submit pipelines programmatically using their API. They also provide a tool, seqerakit, that can be used to submit pipelines through the command line interface (CLI) by defining the entirety of the pipeline's configuration using a YAML file.

Documentation on using Seqerakit will be provided on this page. In the meantime, you can view Seqera's official documentation on Seqerakit here:

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