> For the complete documentation index, see [llms.txt](https://igb.mit.edu/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://igb.mit.edu/bioinformatics-topics/tasks-bioinformatics-methods/genego-metacore/building-network-for-your-experimental-data.md).

# Building Network for Your Experimental Data

* Run a Compare Experiments workflow for ColonMet\_Faked\_FC and ColonMet\_Faked\_FCrand1\_edit.
* Identify and select the common network objects in this comparison (10 Network objects) by clicked the blue/white histogram.
* Click Analyze networks to produce a list of networks associated with the list.
* Return to the Network options page and click Add network objects and add ITGA5.
* Re-run Analyze Networks, using default settings. NOTE: Adding ITGA5 produces and additional network.
* There 11 different network building algorithms available.
* Clicking on network name opens the highly interactive network viewer. Explore the extensive control over the visualization.


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