One-click Analysis Tab

Pathway Maps

  • Activate only the ColonMet_Faked experiment and select appropriate thresholds.

  • From the Start Page, select the One-click Analysis button and pick the Pathway Maps tool

  • Analysis will consider only the Pathway maps

  • It can be run on multiple experiments as well.

Map Folders

  • Activate only the ColonMet_Faked experiment and select appropriate thresholds.

  • From the Start Page, select the One-click Analysis button and pick the Map Folders tool

  • Analysis will consider functionally related Pathway Map groups resulting in alteration of scoring and statistics.

  • It can be run on multiple experiments as well.

  • Clicking on a result folder leads to a results page displaying data for the composite Pathway Maps

Process Networks

  • Activate only the ColonMet_Faked experiment and select appropriate thresholds.

  • From the Start Page, select the One-click Analysis button and pick the Process Networks tool

  • Analysis will consider enrichment in various annotated process networks.

  • It can be run on multiple experiments as well.

  • Clicking on a result leads to a page displaying data for the indicated Process Network.

Last updated

Massachusetts Institute of Technology